IMSmining Software Package

  • Software Download: IMSmining software package including Readme file and sample training and testing data sets


    This software package was developed based on Imaging Mass Spectrometry Data Biomarker Selection and Classification using multivariate analysis and wavelet framework, a tool development paper:

  • JS. Liang, FZ Zhang, JC. Zou, and D. Hong, IMSmining: A Tool for Imaging Mass Spectrometry Data Biomarker Selection and Classification, Springer Proceedings in Mathematics & Statistics, Volume 139: Mathematics and Computing, pp.155-162, Springer, New York, 2015.

    The following are related papers for reference:

  • Fengqing (Zoe) Zhang and Don Hong, Elastic-Net Model for Imaging Mass Spectrometry Data Processing, Statistics in Medicine, 30 (2011), 753-768. DOI: 10.1002/sim.4147, March 2011.

  • D. Hong and F. Zhang, Weighted Elastic Net Model for Imaging Mass Spectrometry Data Processing, Math. Model. Nat. Phenom., a href="https://www.cambridge.org/core/journals/mathematical-modelling-of-natural-phenomena/article/abs/weighted-elastic-net-model-for-mass-spectrometry-imaging-processing/C944C57E52A2BE0DD54DD48C30E7B81C"> Vol. 5, No. 3, 2010, pp. 115-133.

  • Don Hong, Shiyin Qin, and Fengqing (Zoe) Zhang, Mathematical Tools and Statistical Techniques for Proteomic Data Mining, International Journal of Mathematics and Computer Science, 5(2010), no. 2, 123-140.

  • Lu Xiong and Don Hong, Multi-Resolution Analysis Method for IMS Proteomic Data Biomarker Selection and Classification, British Journal of Mathematics & Computer Science, 5(1): 64-80, 2015. DOI: 10.9734/BJMCS/2015/9870.

    Please send your comments/sugestions on the software to Don Hong or Jingsai Liang.

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